Genome Consortium Data Sets
Atta cephalotes Genome Assembly version 1.0.
Acep_1.0_scaffolds.fa.gz: contains the A. cephalotes genome assembled into scaffolds, in FASTA format, compressed.
Atta cephalotes Official Gene Set v1.2, with assigned Hymenoptera Genome Database identifiers (HGD-IDs)
This updated and renamed version of the A. cephalotes OGS incorporates the extensive efforts on manual annotation from the leaf cutter ant research community.
acep_OGSv1.2_pep.fa.gz: contains all predicted proteins in this gene set.
acep_OGSv1.2_transcript.fa.gz: contains transcript sequences.
acep_OGSv1.2.gff3.gz: contains all gene and pseudogene annotations, in a gff version 3 file.
Atta cephalotes Official Gene Set v1.2, without HGD-IDs
This version of the A. cephalotes OGS includes manual annotations from the leaf cutter ant research community.
acep.genome.OGS.1.2.maker.proteins.fasta.gz: contains all predicted proteins for this gene set.
acep.genome.OGS.1.2.maker.transcripts.fasta.gz: contains all transcripts for genes (translated region).
acep.genome.OGS.1.2.gff.gz: contains all gene and pseudogene annotations.
Atta cephalotes Official Gene Set v1.1
acephalotes_OGS1.1_protein.fa.gz
acephalotes_OGS1.1_single_isoform.fa.gz: contains OGSv1.1 Proteins with single isoforms.
acephalotes_OGS1.1_transcript.fa.gz: contains the OGSv1.1 Transcripts.