We have developed a computational pipeline for GO annotation and will apply it to all species in the next HGD/HymenopteraMine update anticipated in Fall 2020. For now, GO annotation is available for Apis mellifera. This GO annotation data is not yet loaded into HymenopteraMine. Please cite HGD if you use this GO annotation data.
GO annotation file in gaf format
GO ontology file used in developing this annotation release
User friendly tab delimited files separated according to ontology
Columns are 1) NCBI gene id, 2) list of GO ids separated by semi-colons, 3) list of GO descriptions separated by semi-colons, with same order as GO ids in column 2.
Files formatted for input to command line GeneMerge
Description Files (not organism-specific):
Association files (see below for explanation of "all" and "direct"):
Note that the "direct" files contain the annotations provided in the gaf file above. The "all" files contain the direct annotations as well as all of their parent terms, up through the heirarchy. These are comparable to the "direct" and "all" datasets provided on the David website.